PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT04248
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 199aa    MW: 22554.5 Da    PI: 9.6708
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT04248genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73e-0986110125
                      TSSS-HHHHHHHHHHHHHTTTT-HH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWk 25 
                      +g+WT+eEde+++d+v+++G   W+
         EMT04248  86 KGPWTQEEDEKIIDLVNKYGLTKWS 110
                      79******************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.9E-879111IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.1E-1081111IPR009057Homeodomain-like
PROSITE profilePS500907.07381110IPR017877Myb-like domain
PfamPF002495.7E-786110IPR001005SANT/Myb domain
CDDcd001672.67E-688111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MSHLLFLALL RTLMGWVCLQ RSSPLQSYKL ARQCSGFLLL SVSPTKTLKF GDKEKYLPTQ  60
LNYFRIGQRC NVYIHGRRFF NTELIKGPWT QEEDEKIIDL VNKYGLTKWS HCQLPELPAA  120
DPRMFPNMFN LSALGQVTRH ALRVYFGGLP PIANEQTVAL FFNQVLAAIG GNTFGLGDAV  180
VNMKLIFEFI QNILGGIII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2364943e-51HQ236494.1 Triticum aestivum MYB3R transcription factor (MYB3R1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BBZ51e-147M8BBZ5_AEGTA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.21e-10myb domain protein 3r-5